Stem-loop cpi-mir-135-1

Accession

MI0029476

Description

Chrysemys picta cpi-mir-135-1 precursor miRNA

Sequence

ucccacugucuucUAUGGCUUUUUAUUCCUAUGUGauuauacugcuaauuucAUAUAGGGAUUGAAGCCGUGCAauacgcuggggcu
.((((.(((.((.(((((((((..((((((((((((..............)))))))))))).))))))))).)).))).))))...

Structure

--u    c   c  c         UU            uuauac 
   ccca ugu uu UAUGGCUUU  AUUCCUAUGUGa      u
   |||| ||| || |||||||||  ||||||||||||       
   gggu gca aA GUGCCGAAG  UAGGGAUAUAcu      g
ucg    c   u  C         -U            uuaauc 

Annotation confidence Not enough data

Genome context

KK083011.1: 696089-696175 [-]

Mature cpi-miR-135-5p

• Accession: MIMAT0037754
• Description: Chrysemys picta cpi-miR-135-5p mature miRNA
• Sequence: 14 - UAUGGCUUUUUAUUCCUAUGUG - 35
• Evidence: experimental ; Illumina [1]

Mature cpi-miR-135-3p

• Accession: MIMAT0037755
• Description: Chrysemys picta cpi-miR-135-3p mature miRNA
• Sequence: 53 - AUAUAGGGAUUGAAGCCGUGCA - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196