miRBase entry: cpi-mir-155a

Stem-loop cpi-mir-155a


Accession
MI0029498
Description
Chrysemys picta cpi-mir-155a precursor miRNA


Sequence

uaggcuguauguugUUAAUGCUAAUCGUGAUAGGGGuuuuuaccuaugacugacuccuacauguuagcauuaacacuguaugaugccuuu
.((((.(((((.((((((((((((.((((.((((((((.............)))))))))))))))))))))))).)))))...))))..

Structure
-u    --u     u            U    A        uuuac 
  aggc   guaug ugUUAAUGCUAA CGUG UAGGGGuu     c
  ||||   ||||| |||||||||||| |||| ||||||||     u
  uccg   uaugu acaauuacgauu guac auccucag     a
uu    uag     c            -    -        ucagu 


Annotation confidence Not enough data
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Genome context
KK082968.1: 80872-80961 [-]

Database links

Mature cpi-miR-155a-5p

Accession MIMAT0037789
Description Chrysemys picta cpi-miR-155a-5p mature miRNA
Sequence 15 - UUAAUGCUAAUCGUGAUAGGGG - 36
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196