Stem-loop cpi-mir-182

Accession

MI0029506

Description

Chrysemys picta cpi-mir-182 precursor miRNA

Sequence

ucucucucgcugucUUUGGCAAUGGUAGAACUCACACUggugagguaucaggauccggUGGUUCUAGACUUGCCAACUAccgcccgaggguaca
.(((((..((.((..(((((((...((((((...(((((((((....)))....))))))))))))...)))))))..)).))..)))))....

Structure

---u     uc  u  cU       UGG      UCA      ----   g 
    cucuc  gc gu  UUGGCAA   UAGAAC   CACUgg    uga g
    |||||  || ||  |||||||   ||||||   ||||||    |||  
    gggag  cg cA  AACCGUU   AUCUUG   GUggcc    acu u
acau     cc  c  UC       CAG      ---      uagg   a 

Annotation confidence Not enough data

Genome context

KK083104.1: 1287313-1287406 [+]

Mature cpi-miR-182-5p

• Accession: MIMAT0037798
• Description: Chrysemys picta cpi-miR-182-5p mature miRNA
• Sequence: 15 - UUUGGCAAUGGUAGAACUCACACU - 38
• Evidence: experimental ; Illumina [1]

Mature cpi-miR-182-3p

• Accession: MIMAT0037799
• Description: Chrysemys picta cpi-miR-182-3p mature miRNA
• Sequence: 59 - UGGUUCUAGACUUGCCAACUA - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196