Stem-loop cpi-mir-187

Accession

MI0029509

Description

Chrysemys picta cpi-mir-187 precursor miRNA

Sequence

cugacauauugugagaccucgGGCUACAACACAGGACAUGGGAgcuuuucugaacccUCGUGUCUUGUGUUGCAGCCAGaggggcacaucuuuacagc
(((......((((...((((.((((.((((((((((((((((.(.((....)).).)))))))))))))))).)))).))))..))))......))).

Structure

-   acauau    aga    g    A                A c  u 
 cug      ugug   ccuc GGCU CAACACAGGACAUGGG g uu u
 |||      ||||   |||| |||| |||||||||||||||| | ||  
 gac      acac   ggaG CCGA GUUGUGUUCUGUGCUc c ag c
c   auuucu    -gg    A    C                c a  u 

Annotation confidence Not enough data

Genome context

KK082940.1: 6530753-6530850 [+]

Mature cpi-miR-187-5p

• Accession: MIMAT0037802
• Description: Chrysemys picta cpi-miR-187-5p mature miRNA
• Sequence: 22 - GGCUACAACACAGGACAUGGGA - 43
• Evidence: experimental ; Illumina [1]

Mature cpi-miR-187-3p

• Accession: MIMAT0037803
• Description: Chrysemys picta cpi-miR-187-3p mature miRNA
• Sequence: 58 - UCGUGUCUUGUGUUGCAGCCAG - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196