Stem-loop cpi-mir-459

Accession

MI0029575

Description

Chrysemys picta cpi-mir-459 precursor miRNA

Sequence

acuguuucuuguaaUCAGUAACAAGGAUUCAUCCUuguguauaguaaauaacaGGGAGAAUCUUUGUCACUAAGuacaauuaacagcuau
.(((((..(((((...(((.((((((((((.(((((((............))))))))))))))))).)))...)))))..)))))....

Structure

---a     uc     aUC   A          A       guaua 
    cuguu  uugua   AGU ACAAGGAUUC UCCUugu     g
    |||||  |||||   ||| |||||||||| |||||||      
    gacaa  aacau   UCA UGUUUCUAAG AGGGaca     u
uauc     uu     GAA   C          -       auaaa 

Annotation confidence Not enough data

Genome context

KK088238.1: 2863889-2863978 [-]

Mature cpi-miR-459-5p

• Accession: MIMAT0037892
• Description: Chrysemys picta cpi-miR-459-5p mature miRNA
• Sequence: 15 - UCAGUAACAAGGAUUCAUCCU - 35
• Evidence: experimental ; Illumina [1]

Mature cpi-miR-459-3p

• Accession: MIMAT0037893
• Description: Chrysemys picta cpi-miR-459-3p mature miRNA
• Sequence: 54 - GGGAGAAUCUUUGUCACUAAG - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196