Stem-loop cpi-mir-460a

Accession

MI0029576

Description

Chrysemys picta cpi-mir-460a precursor miRNA

Sequence

cugacuuuauagaaCCUGCAUUGUACACACUGUGUGuauugauuggacaugCACAGCGCAUACAAUGUGGAUacuguagacgucaau
.(((((((((((...((((((((((..(.((((((((.((.....)).)))))))).)..))))))))))...))))))).))))..

Structure

-c    -       aaC          CA A        a  g 
  ugac uuuauag   CUGCAUUGUA  C CUGUGUGu uu a
  |||| |||||||   ||||||||||  | |||||||| || u
  acug agauguc   GGUGUAACAU  G GACACgua ag u
ua    c       aUA          AC C        c  g 

Annotation confidence Not enough data

Genome context

KK082971.1: 178903-178989 [-]

Mature cpi-miR-460a-5p

• Accession: MIMAT0037894
• Description: Chrysemys picta cpi-miR-460a-5p mature miRNA
• Sequence: 15 - CCUGCAUUGUACACACUGUGUG - 36
• Evidence: experimental ; Illumina [1]

Mature cpi-miR-460a-3p

• Accession: MIMAT0037895
• Description: Chrysemys picta cpi-miR-460a-3p mature miRNA
• Sequence: 52 - CACAGCGCAUACAAUGUGGAU - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196