Stem-loop cpi-mir-1677f

Accession

MI0029599

Description

Chrysemys picta cpi-mir-1677f precursor miRNA

Sequence

uacugugauaccaauaaaugaccaugugaaguugaugggagucuuuccAUUGACUUCAGUGGGCUUUGGAucagguccuguguugguaagggggaa
..((.(..((((((((...((((((.(((((((.((.((((((........)))))).)).))))))).))..))))...))))))))..).))..

Structure

ua  g ga        aau    --  g       g  g      uuu 
  cu u  uaccaaua   gacc  au ugaaguu au ggaguc   c
  || |  ||||||||   ||||  || ||||||| || ||||||    
  gg g  augguugu   cugg  uA GUUUCGG UG CUUCAG   c
aa  g ga        guc    ac  G       G  A      UUA 

Annotation confidence Not enough data

Genome context

KK082931.1: 4751456-4751551 [-]

Mature cpi-miR-1677f-3p

• Accession: MIMAT0037930
• Description: Chrysemys picta cpi-miR-1677f-3p mature miRNA
• Sequence: 49 - AUUGACUUCAGUGGGCUUUGGA - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196