Stem-loop cpi-mir-1791

Accession

MI0029606

Description

Chrysemys picta cpi-mir-1791 precursor miRNA

Sequence

ugcaccauguUGGGCUGCAUCAGUCAUGCCAUguuaugaaaccuaacacgaugugacugaugcaggcugacauga
.....((((((((.((((((((((((((.(.(((((.......))))).).)))))))))))))).)))))))).

Structure

ugcac        G              C A     ug 
     cauguUGG CUGCAUCAGUCAUG C Uguua  a
     |||||||| |||||||||||||| | |||||  a
     guacaguc gacguagucagugu g acaau  a
----a        g              a c     cc 

Annotation confidence Not enough data

Genome context

chr15: 15142532-15142606 [+]

Mature cpi-miR-1791-5p

• Accession: MIMAT0037938
• Description: Chrysemys picta cpi-miR-1791-5p mature miRNA
• Sequence: 11 - UGGGCUGCAUCAGUCAUGCCAU - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196