miRBase entry: cpi-mir-9586

Stem-loop cpi-mir-9586


Accession
MI0029623
Description
Chrysemys picta cpi-mir-9586 precursor miRNA


Sequence

gagacuugggccUUGAUCCUGCCAUGAUCUCUGCAgaaacaaacccuugUGGAGCUCAUUGCAGGACUGGGaccuuaguuuu
((((((.((((((.(.((((((.((((.((((((((..........)))))))).)))).))))))).))).))).))))))

Structure
      u   -   U A      C    U        aaac 
gagacu ggg ccU G UCCUGC AUGA CUCUGCAg    a
|||||| ||| ||| | |||||| |||| ||||||||     
uuuuga ucc GGG C AGGACG UACU GAGGUguu    a
      u   a   U -      U    C        ccca 


Annotation confidence Not enough data
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Genome context
KK082946.1: 610599-610680 [+]

Database links

Mature cpi-miR-9586-5p

Accession MIMAT0037968
Description Chrysemys picta cpi-miR-9586-5p mature miRNA
Sequence 13 - UUGAUCCUGCCAUGAUCUCUGCA - 35
Evidence experimental
Illumina [1]

Mature cpi-miR-9586-3p

Accession MIMAT0037969
Description Chrysemys picta cpi-miR-9586-3p mature miRNA
Sequence 50 - UGGAGCUCAUUGCAGGACUGGG - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196