Stem-loop ami-mir-107

Accession

MI0029715

Description

Alligator mississippiensis ami-mir-107 precursor miRNA

Sequence

guauucucuuugcuuucAGCUUCUUUACAGUGCUGCCUUGuugcauuuaugucaAGCAGCAUUGUACAGGGCUAUcaaagcggagagagcugca
((((((((((((((((.((((.((.(((((((((((.(((..(((....))))))))))))))))).))))))...))))))))))))).))).

Structure

-   -             --c    U  U           C   uu   u 
 gua uucucuuugcuuu   AGCU CU UACAGUGCUGC UUG  gca u
 ||| |||||||||||||   |||| || ||||||||||| |||  |||  
 cgu gagagaggcgaaa   UCGG GA AUGUUACGACG Aac  ugu u
a   c             cUA    -  C           -   --   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature ami-miR-107-5p

• Accession: MIMAT0038121
• Description: Alligator mississippiensis ami-miR-107-5p mature miRNA
• Sequence: 18 - AGCUUCUUUACAGUGCUGCCUUG - 40
• Evidence: experimental ; Illumina [1]

Mature ami-miR-107-3p

• Accession: MIMAT0038122
• Description: Alligator mississippiensis ami-miR-107-3p mature miRNA
• Sequence: 55 - AGCAGCAUUGUACAGGGCUAU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196