miRBase entry: ami-mir-124-3

Stem-loop ami-mir-124-3


Accession
MI0029719
Description
Alligator mississippiensis ami-mir-124-3 precursor miRNA


Sequence

ccaggcgagccccucucugCGUGUUCACAGCGGACCUUGAUuuaauguccauacaauUAAGGCACGCGGUGAAUGCCAagagaggagccucacagc
....(.((((.(((((((..((((((((.(((..((((((((............))))))))..))).))))))))..))))))).).))).)...

Structure
ccag c   - c       gC        A   GA        uaaug 
    g gag c ccucucu  GUGUUCAC GCG  CCUUGAUu     u
    | ||| | |||||||  |||||||| |||  ||||||||      
    c cuc g ggagaga  CGUAAGUG CGC  GGAAUuaa     c
-cga a   c a       AC        G   AC        cauac 


Annotation confidence Not enough data
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Genome context
AKHW03001485.1: 760217-760312 [-]

Database links

Mature ami-miR-124-5p

Accession MIMAT0038125
Description Alligator mississippiensis ami-miR-124-5p mature miRNA
Sequence 20 - CGUGUUCACAGCGGACCUUGAU - 41
Evidence experimental
Illumina [1]

Mature ami-miR-124-3p

Accession MIMAT0038126
Description Alligator mississippiensis ami-miR-124-3p mature miRNA
Sequence 58 - UAAGGCACGCGGUGAAUGCCA - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196