Stem-loop ami-mir-181b-3

Accession

MI0029766

Description

Alligator mississippiensis ami-mir-181b-3 precursor miRNA

Sequence

aaaaagucacaaucAACAUUCAUUGCUGUCGGUGGGUUgugaugcugaagggaaaaCUCACGGAUCAAUGAAUGCAAcugugauuggaaca
....(((((((.....(((((((((..(((.(((((((................))))))).))))))))))))....)))))))......

Structure

--aaaa       aucAA         CU   G       gugaugc 
      agucaca     CAUUCAUUG  GUC GUGGGUU       u
      |||||||     |||||||||  ||| |||||||        
      uuagugu     GUAAGUAAC  UAG CACUCaa       g
acaagg       -cAAC         --   G       aagggaa 

Annotation confidence Not enough data

Genome context

AKHW03005909.1: 105409-105499 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ami-mir-181b-3

Mature ami-miR-181b-5p

• Accession: MIMAT0038190
• Description: Alligator mississippiensis ami-miR-181b-5p mature miRNA
• Sequence: 15 - AACAUUCAUUGCUGUCGGUGGGUU - 38
• Evidence: experimental ; Illumina [1]

Mature ami-miR-181b-3-3p

• Accession: MIMAT0038193
• Description: Alligator mississippiensis ami-miR-181b-3-3p mature miRNA
• Sequence: 57 - CUCACGGAUCAAUGAAUGCAA - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196