miRBase entry: ami-mir-203

Stem-loop ami-mir-203


Accession
MI0029788
Description
Alligator mississippiensis ami-mir-203 precursor miRNA


Sequence

cgcucuccgccucgcgggugcAGUGGUUCUUAACAGUUCAACAGuucuuuaggcuaauuGUGAAAUGUUUAGGACCACUUgacccgcgaggcgccgc
.......((((((((((((..(((((((((.((((.((((.(((((.........))))))))).)))).)))))))))..))))))))))))....

Structure
cgcucuc            gc         U    G    A     cuu 
       cgccucgcgggu  AGUGGUUCU AACA UUCA CAGuu   u
       ||||||||||||  ||||||||| |||| |||| |||||   a
       gcggagcgccca  UCACCAGGA UUGU AAGU Guuaa   g
---cgcc            gU         U    A    -     ucg 


Annotation confidence Not enough data
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Genome context
AKHW03006807.1: 9204412-9204508 [-]

Database links

Mature ami-miR-203-5p

Accession MIMAT0038223
Description Alligator mississippiensis ami-miR-203-5p mature miRNA
Sequence 22 - AGUGGUUCUUAACAGUUCAACAG - 44
Evidence experimental
Illumina [1]

Mature ami-miR-203-3p

Accession MIMAT0038224
Description Alligator mississippiensis ami-miR-203-3p mature miRNA
Sequence 60 - GUGAAAUGUUUAGGACCACUU - 80
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196