miRBase entry: ami-mir-208

Stem-loop ami-mir-208


Accession
MI0029794
Description
Alligator mississippiensis ami-mir-208 precursor miRNA


Sequence

gcugcuuccuccaacagggaagcuuuuggcuuggguuauauugucacucgcaguguAUAAGACGAGCGAAAAGCUUCUugguuggaagagagau
.....(((.((((((.(((((((((((.(((((...((((((((.....)))))))).....))))).))))))))))).)))))).)))....

Structure
gcugc   c      a           g     --ggu        c 
     uuc uccaac gggaagcuuuu gcuug     uauauugu a
     ||| |||||| ||||||||||| |||||     |||||||| c
     gag agguug uUCUUCGAAAA CGAGC     Augugacg u
-uaga   a      g           G     AGAAU        c 


Annotation confidence Not enough data
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Genome context
AKHW03002411.1: 122937-123030 [-]

Database links

Mature ami-miR-208-3p

Accession MIMAT0038233
Description Alligator mississippiensis ami-miR-208-3p mature miRNA
Sequence 57 - AUAAGACGAGCGAAAAGCUUCU - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196