miRBase entry: ami-mir-218-2

Stem-loop ami-mir-218-2


Accession
MI0029803
Description
Alligator mississippiensis ami-mir-218-2 precursor miRNA


Sequence

aaugggguuuuccuUUGUGCUUGAUCUAACCAUGUgguagaacaauacaaauugaacaugguucugucaagcaccauggaaggcugcaua
.(((.((((((((...(((((((((..((((((((....................))))))))..)))))))))...)))))))).))).

Structure
a   g        uUU         CU        gguagaaca 
 aug gguuuucc   GUGCUUGAU  AACCAUGU         a
 ||| ||||||||   |||||||||  ||||||||          
 uac ucggaagg   cacgaacug  uugguaca         u
a   g        uac         uc        aguuaaaca 


Annotation confidence Not enough data
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Genome context
AKHW03002337.1: 9433963-9434052 [+]

Database links

Mature ami-miR-218-5p

Accession MIMAT0038247
Description Alligator mississippiensis ami-miR-218-5p mature miRNA
Sequence 15 - UUGUGCUUGAUCUAACCAUGU - 35
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196