miRBase entry: ami-mir-375

Stem-loop ami-mir-375


Accession
MI0029821
Description
Alligator mississippiensis ami-mir-375 precursor miRNA


Sequence

cuggccgcccucugcgccugccuggcgucgagcccgacgugcaagaccugacgugaauguUUUGUUCGUUCGGCUCGCGUUaggcaggcccagccugucu
..(((......(((.((((((((((((.((((((.((((.(((((((.(.......).))))))).)))).)))))))))))))))))).)))...))).

Structure
cu   cgcccu   c            u      c    u       c ga 
  ggc      cug gccugccuggcg cgagcc gacg gcaagac u  c
  |||      ||| |||||||||||| |||||| |||| ||||||| |  g
  cug      gac cggacggaUUGC GCUCGG UUGC UGUUUug a  u
-u   ---ucc   c            -      C    U       u ag 


Annotation confidence Not enough data
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Genome context
AKHW03006149.1: 6770-6869 [-]

Database links

Mature ami-miR-375-3p

Accession MIMAT0038275
Description Alligator mississippiensis ami-miR-375-3p mature miRNA
Sequence 61 - UUUGUUCGUUCGGCUCGCGUU - 81
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196