miRBase entry: ami-mir-458

Stem-loop ami-mir-458


Accession
MI0029832
Description
Alligator mississippiensis ami-mir-458 precursor miRNA


Sequence

uggugcagauggcagcgccauuuucagagcuauaaacaguaucauugucAUAGCUCUUUGAAUGGUACUGCcauauguacug
.((((((.(((((((.(((((((..((((((((..(((((...))))).))))))))..))))))).))))))).)))))).

Structure
u      g       c       uc        aa     a 
 ggugca auggcag gccauuu  agagcuau  acagu  
 |||||| ||||||| |||||||  ||||||||  ||||| u
 ucaugu uacCGUC UGGUAAG  UCUCGAUA  uguua  
g      a       A       UU        -c     c 


Annotation confidence Not enough data
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Genome context
AKHW03006437.1: 12830873-12830954 [-]

Database links

Mature ami-miR-458-3p

Accession MIMAT0038290
Description Alligator mississippiensis ami-miR-458-3p mature miRNA
Sequence 50 - AUAGCUCUUUGAAUGGUACUGC - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196