miRBase entry: ami-mir-460a

Stem-loop ami-mir-460a


Accession
MI0029834
Description
Alligator mississippiensis ami-mir-460a precursor miRNA


Sequence

ugacuuuauaggaCCUGCAUUGUACACACUGUGUGuauugacugggcgugcacagcgcauacaauguggauacuguagaaguca
(((((((((((...((((((((((..(.((((((...............)))))).)..))))))))))...)))).)))))))

Structure
       -    gaC          CA A      Guauug 
ugacuuu auag   CUGCAUUGUA  C CUGUGU      a
||||||| ||||   ||||||||||  | ||||||      c
acugaag uguc   gguguaacau  g gacacg      u
       a    aua          ac c      ugcggg 


Annotation confidence Not enough data
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Genome context
AKHW03006878.1: 2458931-2459014 [+]

Database links

Mature ami-miR-460a-5p

Accession MIMAT0038292
Description Alligator mississippiensis ami-miR-460a-5p mature miRNA
Sequence 14 - CCUGCAUUGUACACACUGUGUG - 35
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196