miRBase entry: ami-mir-490

Stem-loop ami-mir-490


Accession
MI0029837
Description
Alligator mississippiensis ami-mir-490 precursor miRNA


Sequence

guucaugguucgacaCCAUGGAUCUCCAGGUGGGUCAagacuauagagauacacCAACCUGGAGGACUCCAUGCUGuugagcuguucaca
((..(((((((((((.(((((((((((((((.(((.....((....))....))).)))))))))..)))))).)))))))))))..)).

Structure
-  uc           C      --         G   CAaga  a 
 gu  augguucgaca CAUGGA  UCUCCAGGU GGU     cu u
 ||  ||||||||||| ||||||  ||||||||| |||     ||  
 ca  ugucgaguuGU GUACCU  GGAGGUCCA Cca     ga a
a  cu           C      CA         A   -caua  g 


Annotation confidence Not enough data
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Genome context
AKHW03002956.1: 14945777-14945866 [-]

Database links

Mature ami-miR-490-5p

Accession MIMAT0038297
Description Alligator mississippiensis ami-miR-490-5p mature miRNA
Sequence 16 - CCAUGGAUCUCCAGGUGGGUCA - 37
Evidence experimental
Illumina [1]

Mature ami-miR-490-3p

Accession MIMAT0038298
Description Alligator mississippiensis ami-miR-490-3p mature miRNA
Sequence 55 - CAACCUGGAGGACUCCAUGCUG - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196