miRBase entry: ami-mir-551-1

Stem-loop ami-mir-551-1


Accession
MI0029840
Description
Alligator mississippiensis ami-mir-551-1 precursor miRNA


Sequence

uucugcuuuaaccuugGAAAUCAAGGAUGGGUGAAGCcuguuggaauaacucuagGCGACCCAUACUUGGUUUCAagggucagcagggauu
(((((((...(((((.(((((((((..(((((...(((((..(......)..))))).)))))..))))))))).))))).)))))))...

Structure
---       uua     g         GA     GAA     uu ga 
   uucugcu   accuu GAAAUCAAG  UGGGU   GCcug  g  a
   |||||||   ||||| |||||||||  |||||   |||||  |   
   gggacga   uggga CUUUGGUUC  ACCCA   CGgau  c  u
uua       --c     A         AU     --G     cu aa 


Annotation confidence Not enough data
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Genome context
AKHW03004073.1: 2467664-2467754 [+]

Database links

Mature ami-miR-551-5p

Accession MIMAT0038303
Description Alligator mississippiensis ami-miR-551-5p mature miRNA
Sequence 17 - GAAAUCAAGGAUGGGUGAAGC - 37
Evidence experimental
Illumina [1]

Mature ami-miR-551-3p

Accession MIMAT0038304
Description Alligator mississippiensis ami-miR-551-3p mature miRNA
Sequence 56 - GCGACCCAUACUUGGUUUCA - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196