miRBase entry: ami-mir-1677a

Stem-loop ami-mir-1677a


Accession
MI0029852
Description
Alligator mississippiensis ami-mir-1677a precursor miRNA


Sequence

cuccaggcuugguccaaugcucauugaagucauggagaaucuuuacacUGACUUCACUGAGCUUUGGACcagguuucaugagaa
(((.(((((((((((((.(((((.((((((((((...........)).)))))))).))))).)))))))))))))...)))..

Structure
--   --c             u     u        -  gaga 
  cuc   aggcuugguccaa gcuca ugaaguca ug    a
  |||   ||||||||||||| ||||| |||||||| ||    u
  gag   uuuggacCAGGUU CGAGU ACUUCAGU ac    c
aa   uac             U     C        c  auuu 


Annotation confidence Not enough data
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Genome context
AKHW03006780.1: 18734775-18734858 [+]

Database links

Mature ami-miR-1677a-3p

Accession MIMAT0038319
Description Alligator mississippiensis ami-miR-1677a-3p mature miRNA
Sequence 49 - UGACUUCACUGAGCUUUGGAC - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196