miRBase entry: ami-mir-1791

Stem-loop ami-mir-1791


Accession
MI0029857
Description
Alligator mississippiensis ami-mir-1791 precursor miRNA


Sequence

ugaugcaccauguUGGGCUGCCUCAGUCAUGCCAUGuuaugaaaccuaaugCAAUGUGACUGAUGCAGGCUGACgugauguguca
(((((((.((((((((.((((.(((((((((...(((.((........))))).))))))))).)))).)))))))).)))))))

Structure
       c        G    C         CCA   u  gaa 
ugaugca cauguUGG CUGC UCAGUCAUG   UGu au   a
||||||| |||||||| |||| |||||||||   ||| ||    
acugugu gugCAGUC GACG AGUCAGUGU   ACg ua   c
       a        G    U         --A   -  auc 


Annotation confidence Not enough data
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Genome context
AKHW03003905.1: 1986165-1986249 [+]

Database links

Mature ami-miR-1791-5p

Accession MIMAT0038327
Description Alligator mississippiensis ami-miR-1791-5p mature miRNA
Sequence 14 - UGGGCUGCCUCAGUCAUGCCAUG - 36
Evidence experimental
Illumina [1]

Mature ami-miR-1791-3p

Accession MIMAT0038328
Description Alligator mississippiensis ami-miR-1791-3p mature miRNA
Sequence 52 - CAAUGUGACUGAUGCAGGCUGAC - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196