miRBase entry: ami-mir-1805

Stem-loop ami-mir-1805


Accession
MI0029858
Description
Alligator mississippiensis ami-mir-1805 precursor miRNA


Sequence

uggaauauucugggAGUUGUAGUCUUUCAAACAGAgcuuugcaaguacauaccUGUAUUGGAACACUACAGCUCCcugaacuuccuaguguca
.((((..(((.((((((((((((.((((((((((..................)))).)))))).)))))))))))).))).))))........

Structure
-------u    ua   u            C      -    Agcuuugc 
        ggaa  uuc gggAGUUGUAGU UUUCAA ACAG        a
        ||||  ||| |||||||||||| |||||| ||||         
        ccuu  aag cCCUCGACAUCA AAGGUU UGUc        a
acugugau    -c   u            C      A    cauacaug 


Annotation confidence Not enough data
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Genome context
AKHW03001628.1: 19192125-19192217 [+]

Database links

Mature ami-miR-1805-5p

Accession MIMAT0038329
Description Alligator mississippiensis ami-miR-1805-5p mature miRNA
Sequence 15 - AGUUGUAGUCUUUCAAACAGA - 35
Evidence experimental
Illumina [1]

Mature ami-miR-1805-3p

Accession MIMAT0038330
Description Alligator mississippiensis ami-miR-1805-3p mature miRNA
Sequence 54 - UGUAUUGGAACACUACAGCUCC - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196