Stem-loop ami-mir-9599

Accession

MI0029866

Description

Alligator mississippiensis ami-mir-9599 precursor miRNA

Sequence

ucagaggaaggcaggguaGCUUUGCACCUUACAGACUAACCaaaguagacauauuggUUAAUCUAUAGGUGCAAAUCGAccuugccuucuauuugaca
(((((((((((((((((.(.(((((((((...(((.(((((((.((....)).))))))).)))..))))))))).).)))))))))))).)))))..

Structure

--     -            a C         UAC   C       a  a 
  ucaga ggaaggcagggu G UUUGCACCU   AGA UAACCaa gu g
  ||||| |||||||||||| | |||||||||   ||| ||||||| ||  
  aguuu ucuuccguuccA C AAACGUGGA   UCU AUUgguu ua a
ac     a            G U         -UA   A       a  c 

Annotation confidence Not enough data

Genome context

AKHW03003682.1: 834233-834330 [-]

Mature ami-miR-9599-5p

• Accession: MIMAT0038342
• Description: Alligator mississippiensis ami-miR-9599-5p mature miRNA
• Sequence: 19 - GCUUUGCACCUUACAGACUAACC - 41
• Evidence: experimental ; Illumina [1]

Mature ami-miR-9599-3p

• Accession: MIMAT0038343
• Description: Alligator mississippiensis ami-miR-9599-3p mature miRNA
• Sequence: 58 - UUAAUCUAUAGGUGCAAAUCGA - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196