miRBase entry: ami-mir-9603

Stem-loop ami-mir-9603


Accession
MI0029870
Description
Alligator mississippiensis ami-mir-9603 precursor miRNA


Sequence

acacauccuuggcaauaucUGGGGCACAUCUCUAGAAGCaggaauagucaggaugcucugcUUCUAGUGACUUGCCUUGGAGAuugcuggaggu
......((((.(((((.(((((((((..((.(((((((((((..............))))))))))).))..))))))))).)))))..)))).

Structure
acacau    -g     a         CA  U           aauagu 
      ccuu  gcaau ucUGGGGCA  UC CUAGAAGCagg      c
      ||||  ||||| |||||||||  || |||||||||||       
      ggag  cguuA AGGUUCCGU  AG GAUCUUcgucu      a
-----u    gu     G         UC  U           cguagg 


Annotation confidence Not enough data
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Genome context
AKHW03006295.1: 18005410-18005503 [+]

Database links

Mature ami-miR-9603-5p

Accession MIMAT0038350
Description Alligator mississippiensis ami-miR-9603-5p mature miRNA
Sequence 20 - UGGGGCACAUCUCUAGAAGC - 39
Evidence experimental
Illumina [1]

Mature ami-miR-9603-3p

Accession MIMAT0038351
Description Alligator mississippiensis ami-miR-9603-3p mature miRNA
Sequence 62 - UUCUAGUGACUUGCCUUGGAGA - 83
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196