miRBase entry: cli-mir-7b

Stem-loop cli-mir-7b


Accession
MI0029899
Description
Columba livia cli-mir-7b precursor miRNA


Sequence

cauccccgggcaggcUGGAAGACUUGUGAUUUUGUUGUUuccaaugucaacgggagcgaacaacaaaucccagucuccucccugccccgggcac
...(((.(((((((..(((.((((.(.(((((((((((((((.........)))))).))))..)))))).)))))))..))))))).)))...

Structure
cau   c       cU   A    U U     --    -      aau 
   ccc gggcagg  GGA GACU G GAUUU  UGUU GUUucc   g
   ||| |||||||  ||| |||| | |||||  |||| ||||||   u
   ggg cccgucc  ccu cuga c cuaaa  acaa cgaggg   c
cac   c       cu   -    c -     ca    g      caa 


Annotation confidence Not enough data
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Genome context
KB376649.1: 107537-107630 [-]

Database links

Mature cli-miR-7b-5p

Accession MIMAT0038400
Description Columba livia cli-miR-7b-5p mature miRNA
Sequence 16 - UGGAAGACUUGUGAUUUUGUUGUU - 39
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196