miRBase entry: cli-mir-9-3

Stem-loop cli-mir-9-3


Accession
MI0029902
Description
Columba livia cli-mir-9-3 precursor miRNA


Sequence

accuggguugguuuuucUCUUUGGUUAUCUAGCUGUAUGAguguaugugauaucaUAAAGCUAGAGAACCGAAUGUAaaaacccgcucgcug
...(((((.(((((((...(((((((.(((((((.(((((............))))).))))))).)))))))...))))))).)))))...

Structure
acc     u       cUC       A       G     gugua 
   ugggu gguuuuu   UUUGGUU UCUAGCU UAUGA     u
   ||||| |||||||   ||||||| ||||||| |||||      
   gcucg ccaaaaA   AAGCCAA AGAUCGA AUacu     g
guc     c       UGU       G       A     auagu 


Annotation confidence Not enough data
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Genome context
KB375474.1: 244969-245060 [+]

Database links

Mature cli-miR-9-5p

Accession MIMAT0038401
Description Columba livia cli-miR-9-5p mature miRNA
Sequence 18 - UCUUUGGUUAUCUAGCUGUAUGA - 40
Evidence experimental
Illumina [1]

Mature cli-miR-9-3-3p

Accession MIMAT0038403
Description Columba livia cli-miR-9-3-3p mature miRNA
Sequence 56 - UAAAGCUAGAGAACCGAAUGUA - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196