miRBase entry: cli-mir-19b-1

Stem-loop cli-mir-19b-1

Accession

MI0029916

Description

Columba livia cli-mir-19b-1 precursor miRNA

Sequence

cucugguuAGUUUUGCAGGUUUGCAUCCAGCuguaugauacucugcUGUGCAAAUCCAUGCAAAACUGAcugugg
....(((((((((((((((((((((..((((.............)))))))))).)).)))))))))))))....

Structure

cucu             -  -      UC    uguau 
    gguuAGUUUUGCA GG UUUGCA  CAGC     g
    ||||||||||||| || ||||||  ||||     a
    ucAGUCAAAACGU CC AAACGU  GUcg     u
ggug             A  U      --    ucuca

Annotation confidence Not enough data

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Genome context

KB375488.1: 2837364-2837438 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from cli-mir-19b-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cli-miR-19b-5p

Accession	MIMAT0038429
Description	Columba livia cli-miR-19b-5p mature miRNA
Sequence	9 - AGUUUUGCAGGUUUGCAUCCAGC - 31
Evidence	experimental Illumina [1]

Mature cli-miR-19b-3p

Accession	MIMAT0038430
Description	Columba livia cli-miR-19b-3p mature miRNA
Sequence	47 - UGUGCAAAUCCAUGCAAAACUGA - 69
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196