miRBase entry: cli-mir-19b-2

Stem-loop cli-mir-19b-2


Accession
MI0029917
Description
Columba livia cli-mir-19b-2 precursor miRNA


Sequence

cagugcuaauuacagucAGUUUUGCAGGUUUGCAUCCCAGCuuacuaaaauugcUGUGCAAAUCCAUGCAAAACUGAcuguggugguggug
((.(((((.(((((((((((((((((((((((((...((((...........)))))))))).)).)))))))))))))))))))))).))

Structure
  g     a                 -  -      UCC    uuac 
ca ugcua uuacagucAGUUUUGCA GG UUUGCA   CAGC    u
|| ||||| ||||||||||||||||| || ||||||   ||||    a
gu guggu ggugucAGUCAAAACGU CC AAACGU   GUcg    a
  g     -                 A  U      ---    uuaa 


Annotation confidence Not enough data
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Genome context
KB375349.1: 3451977-3452067 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from cli-mir-19b-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cli-miR-19b-3p

Accession MIMAT0038430
Description Columba livia cli-miR-19b-3p mature miRNA
Sequence 55 - UGUGCAAAUCCAUGCAAAACUGA - 77
Evidence experimental
Illumina [1]

Mature cli-miR-19b-2-5p

Accession MIMAT0038431
Description Columba livia cli-miR-19b-2-5p mature miRNA
Sequence 18 - AGUUUUGCAGGUUUGCAUCCCAGC - 41
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196