miRBase entry: cli-mir-21

Stem-loop cli-mir-21


Accession
MI0029920
Description
Columba livia cli-mir-21 precursor miRNA


Sequence

uccugucggaUAGCUUAUCAGACUGAUGUUGAcuguuggaucucauggcAACAACAGUCGGUAGGCUGUCugacauuu
...((((((((((((((((.(((((.(((((.((((........))))))))).)))))))))))))))))))))...

Structure
ucc                A     A     A    ugg 
   ugucggaUAGCUUAUC GACUG UGUUG cugu   a
   |||||||||||||||| ||||| ||||| ||||    
   acaguCUGUCGGAUGG CUGAC ACAAc ggua   u
uuu                -     A     -    cuc 


Annotation confidence Not enough data
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Genome context
KB375855.1: 434997-435074 [-]

Database links

Mature cli-miR-21-5p

Accession MIMAT0038436
Description Columba livia cli-miR-21-5p mature miRNA
Sequence 11 - UAGCUUAUCAGACUGAUGUUGA - 32
Evidence experimental
Illumina [1]

Mature cli-miR-21-3p

Accession MIMAT0038437
Description Columba livia cli-miR-21-3p mature miRNA
Sequence 50 - AACAACAGUCGGUAGGCUGUC - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196