miRBase entry: cli-mir-30d

Stem-loop cli-mir-30d


Accession
MI0029933
Description
Columba livia cli-mir-30d precursor miRNA


Sequence

cgugguccggugcUGUAAACAUCCCCGACUGGAAGCUguucccguccagCUUUCAGUCAGAUGUUUGCUGCaccuggcugcg
(((((((.(((((.(((((((((...((((((((((((........)))))))))))).))))))))).))))).)))))))

Structure
       c     U         CCC            uuc 
cgugguc ggugc GUAAACAUC   GACUGGAAGCUg   c
||||||| ||||| |||||||||   ||||||||||||    
gcgucgg ccaCG CGUUUGUAG   CUGACUUUCgac   c
       u     U         --A            cug 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KB375768.1: 3168624-3168705 [-]

Database links

Mature cli-miR-30d-5p

Accession MIMAT0038456
Description Columba livia cli-miR-30d-5p mature miRNA
Sequence 14 - UGUAAACAUCCCCGACUGGAAGCU - 37
Evidence experimental
Illumina [1]

Mature cli-miR-30d-3p

Accession MIMAT0038457
Description Columba livia cli-miR-30d-3p mature miRNA
Sequence 50 - CUUUCAGUCAGAUGUUUGCUGC - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196