miRBase entry: cli-mir-101-2

Stem-loop cli-mir-101-2


Accession
MI0029948
Description
Columba livia cli-mir-101-2 precursor miRNA


Sequence

acuaugaacuguccuuuuUCGGUUAUCAUGGUACCGGUGCUguauacgugaaaggUACAGUACUGUGAUAACUGAAgaaugguggugccaucac
...(((.((((.((((((((((((((((((((((..(((((............))))).)))))))))))))))))))).))))))..)))...

Structure
acu   -a    u  -                    CG     guaua 
   aug  acug cc uuuuUCGGUUAUCAUGGUAC  GUGCU     c
   |||  |||| || ||||||||||||||||||||  |||||      
   uac  uggu gg aagAAGUCAAUAGUGUCAUG  CAUgg     g
cac   cg    -  u                    -A     aaagu 


Annotation confidence Not enough data
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Genome context
KB375318.1: 3523017-3523110 [-]

Database links

Mature cli-miR-101-3p

Accession MIMAT0038483
Description Columba livia cli-miR-101-3p mature miRNA
Sequence 56 - UACAGUACUGUGAUAACUGAA - 76
Evidence experimental
Illumina [1]

Mature cli-miR-101-2-5p

Accession MIMAT0038484
Description Columba livia cli-miR-101-2-5p mature miRNA
Sequence 19 - UCGGUUAUCAUGGUACCGGUGCU - 41
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196