miRBase entry: cli-mir-146b

Stem-loop cli-mir-146b


Accession
MI0029981
Description
Columba livia cli-mir-146b precursor miRNA


Sequence

cuggcuacuuggcucUGAGAACUGAAUUCCAUAGGCAUUaaagccucuaaaaaUGCCCUAUGGAUUCAGUUCUGCAGcugggcagcaaa
...(((.(((((((...((((((((((.(((((((((((............)))).)))))))))))))))))..))))))).)))...

Structure
cug   a       cUG          U       -    aaagc 
   gcu cuuggcu   AGAACUGAAU CCAUAGG CAUU     c
   ||| |||||||   |||||||||| ||||||| ||||      
   cga gggucGA   UCUUGACUUA GGUAUCC GUaa     u
aaa   c       -CG          -       C    aaauc 


Annotation confidence Not enough data
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Genome context
KB375604.1: 30533-30621 [+]

Database links

Mature cli-miR-146b-5p

Accession MIMAT0038537
Description Columba livia cli-miR-146b-5p mature miRNA
Sequence 16 - UGAGAACUGAAUUCCAUAGGCAUU - 39
Evidence experimental
Illumina [1]

Mature cli-miR-146b-3p

Accession MIMAT0038538
Description Columba livia cli-miR-146b-3p mature miRNA
Sequence 54 - UGCCCUAUGGAUUCAGUUCUGCAG - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196