miRBase entry: cli-mir-182

Stem-loop cli-mir-182

Accession

MI0029993

Description

Columba livia cli-mir-182 precursor miRNA

Sequence

cggccccggggcugcuUUUGGCAAUGGUAGAACUCACACUggugcgguagcaggauccggUGGUUCUAGACUUGCCAACUacagccccgggggag
...(((((((((((...(((((((...((((((...(((((((((....)))....))))))))))))...)))))))...)))))))))))...

Structure

cgg           cuU       UGG      UCA      ----   g 
   ccccggggcug   UUGGCAA   UAGAAC   CACUgg    ugc g
   |||||||||||   |||||||   ||||||   ||||||    |||  
   ggggccccgac   AACCGUU   AUCUUG   GUggcc    acg u
gag           aUC       CAG      ---      uagg   a

Annotation confidence Not enough data

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Genome context

KB375435.1: 1262243-1262337 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from cli-mir-182

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cli-miR-182-5p

Accession	MIMAT0038556
Description	Columba livia cli-miR-182-5p mature miRNA
Sequence	17 - UUUGGCAAUGGUAGAACUCACACU - 40
Evidence	experimental Illumina [1]

Mature cli-miR-182-3p

Accession	MIMAT0038557
Description	Columba livia cli-miR-182-3p mature miRNA
Sequence	61 - UGGUUCUAGACUUGCCAACU - 80
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196