miRBase entry: cli-mir-215

Stem-loop cli-mir-215

Accession

MI0030016

Description

Columba livia cli-mir-215 precursor miRNA

Sequence

acugguguccaggaaaAUGACCUAUGAAUUGACAGACUgcuuucuaaacuugCCUGUCAUUUCUAUAGGCCAAUAuucugcacacuuuc
...(((((.(((((...((.((((((((.((((((...((...........)))))))).))).))))).))...))))).)))))...

Structure

acu     c     aaA  A     -   U      ACU  uuuc 
   ggugu cagga   UG CCUAU GAA UGACAG   gc    u
   ||||| |||||   || ||||| ||| ||||||   ||    a
   ucaca gucuu   AC GGAUA CUU ACUGUC   Cg    a
cuu     c     AUA  C     U   U      ---  uuca

Annotation confidence Not enough data

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Genome context

KB375331.1: 1524393-1524481 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cli-mir-215

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cli-miR-215-5p

Accession	MIMAT0038594
Description	Columba livia cli-miR-215-5p mature miRNA
Sequence	17 - AUGACCUAUGAAUUGACAGACU - 38
Evidence	experimental Illumina [1]

Mature cli-miR-215-3p

Accession	MIMAT0038595
Description	Columba livia cli-miR-215-3p mature miRNA
Sequence	53 - CCUGUCAUUUCUAUAGGCCAAUA - 75
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196