miRBase entry: cli-mir-302b-2

Stem-loop cli-mir-302b-2

Accession

MI0030030

Description

Columba livia cli-mir-302b-2 precursor miRNA

Sequence

ccucuacuuuaacaugggagguacuugcuggaugccuaaaaaaguAAGUGCUUCCAUGUUUUAGuugugg
((.(.(((..(((((((.(((((((((((.............))))))))))))))))))..))).).))

Structure

  u u   uu       g           ggaug 
cc c acu  aacaugg agguacuugcu     c
|| | |||  ||||||| |||||||||||     c
gg g uGA  UUGUACC UUCGUGAAuga     u
  u u   UU       -           aaaaa

Annotation confidence Not enough data

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Genome context

KB376606.1: 1626801-1626870 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from cli-mir-302b-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cli-miR-302b-3p

Accession	MIMAT0038616
Description	Columba livia cli-miR-302b-3p mature miRNA
Sequence	46 - AAGUGCUUCCAUGUUUUAG - 64
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196