miRBase entry: cli-mir-599

Stem-loop cli-mir-599

Accession

MI0030059

Description

Columba livia cli-mir-599 precursor miRNA

Sequence

acaguguguuugauaagcugacaugggacaggauuucuuuucacugUUGUGUCAGUAUAUCAAACUCAuacc
...(((.((((((((.((((((((..(((((((.......)).))))))))))))).)))))))).)))...

Structure

aca   u        a        gg     -  uu 
   gug guuugaua gcugacau  gacag ga  u
   ||| |||||||| ||||||||  ||||| ||  c
   uAC CAAACUAU UGACUGUG  UUguc cu  u
cca   U        A        --     a  uu

Annotation confidence Not enough data

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Genome context

KB375314.1: 1574678-1574749 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cli-mir-599

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cli-miR-599-3p

Accession	MIMAT0038666
Description	Columba livia cli-miR-599-3p mature miRNA
Sequence	47 - UUGUGUCAGUAUAUCAAACUCA - 68
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196