Stem-loop cli-mir-1550

Accession

MI0030068

Description

Columba livia cli-mir-1550 precursor miRNA

Sequence

agaccugugcaggcuucagcUGAUGGGGGUGCAGUGCAGUAgcuguuuaucaugcuucacuuauccugaucacugguuuaagcugcaccaccaggg
...(((((((((.((((((.((((.((((((.((((.((((...........)))).)))))))))).))))))))....))))))))....))).

Structure

aga   ----      g  ----    c    G      C    C    gcug 
   ccu    gugcag cu    ucag UGAU GGGGUG AGUG AGUA    u
   |||    |||||| ||    |||| |||| |||||| |||| ||||    u
   gga    cacguc ga    gguc acua uccuau ucac ucgu    u
--g   ccac      -  auuu    -    g      -    u    acua 

Annotation confidence Not enough data

Genome context

KB375680.1: 255712-255807 [+]

Mature cli-miR-1550-5p

• Accession: MIMAT0038682
• Description: Columba livia cli-miR-1550-5p mature miRNA
• Sequence: 21 - UGAUGGGGGUGCAGUGCAGUA - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196