miRBase entry: cli-mir-1552

Stem-loop cli-mir-1552


Accession
MI0030069
Description
Columba livia cli-mir-1552 precursor miRNA


Sequence

cuugucuacacggggaagUUAGUGCGCGGUAAGCUAGGGUGugaguuugcagcaCGCUAGCUGCUCUGCACUAACUcccccuguggaugcugag
...(((((((.(((((.(((((((((.((((.(((((.((((.........)))).))))))))).)))))))))))))).)))))))......

Structure
---cuu       c     a         C    A     G    gag 
      gucuaca gggga gUUAGUGCG GGUA GCUAG GUGu   u
      ||||||| ||||| ||||||||| |||| ||||| ||||   u
      uaggugu ccccU CAAUCACGU UCGU CGAUC Cacg   u
gagucg       c     -         C    -     G    acg 


Annotation confidence Not enough data
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Genome context
KB375445.1: 1494054-1494147 [-]

Database links

Mature cli-miR-1552-5p

Accession MIMAT0038683
Description Columba livia cli-miR-1552-5p mature miRNA
Sequence 19 - UUAGUGCGCGGUAAGCUAGGGUG - 41
Evidence experimental
Illumina [1]

Mature cli-miR-1552-3p

Accession MIMAT0038684
Description Columba livia cli-miR-1552-3p mature miRNA
Sequence 55 - CGCUAGCUGCUCUGCACUAACU - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196