miRBase entry: cli-mir-9629

Stem-loop cli-mir-9629


Accession
MI0030108
Description
Columba livia cli-mir-9629 precursor miRNA


Sequence

ucuaccaugguCACGGCCACUCGCACGAGGAGCcgcaccacggcCACUCGCACGAGGGGCUCUACCauggucac
...((((((((...((((.((((..((((..((((.....))))..))))..)))).))))..))))))))...

Structure
ucu        CAC    A    CA    GA    c 
   accauggu   GGCC CUCG  CGAG  GCcg a
   ||||||||   |||| ||||  ||||  |||| c
   ugguaCCA   UCGG GAGC  GCUC  cggc c
cac        -UC    G    AC    AC    a 


Annotation confidence Not enough data
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Genome context
KB376042.1: 23161-23234 [-]

Database links

Mature cli-miR-9629-5p

Accession MIMAT0038749
Description Columba livia cli-miR-9629-5p mature miRNA
Sequence 12 - CACGGCCACUCGCACGAGGAGC - 33
Evidence experimental
Illumina [1]

Mature cli-miR-9629-3p

Accession MIMAT0038750
Description Columba livia cli-miR-9629-3p mature miRNA
Sequence 45 - CACUCGCACGAGGGGCUCUACC - 66
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196