miRBase entry: cli-mir-9631

Stem-loop cli-mir-9631


Accession
MI0030110
Description
Columba livia cli-mir-9631 precursor miRNA


Sequence

guucaaaggcacagaugaUAGCCAGGUGCCUCAUCUCAUGCCuguggaaaaaccugUGUGAGAGGAGUGUCUGACUGUUuucugugccuuugcga
...((((((((((((.(((((.(((..(((((.((((((((..((......))..)))))))).))).))))).))))).))))))))))))...

Structure
guu            u     C   GU  -   A        Cu  gg 
   caaaggcacaga gaUAG CAG  GC CUC UCUCAUGC  gu  a
   |||||||||||| ||||| |||  || ||| ||||||||  ||   
   guuuccgugucu UUGUC GUC  UG GAG AGAGUGUg  ca  a
agc            u     A   --  U   G        uc  aa 


Annotation confidence Not enough data
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Genome context
KB375367.1: 2262179-2262273 [+]

Database links

Mature cli-miR-9631-5p

Accession MIMAT0038753
Description Columba livia cli-miR-9631-5p mature miRNA
Sequence 19 - UAGCCAGGUGCCUCAUCUCAUGCC - 42
Evidence experimental
Illumina [1]

Mature cli-miR-9631-3p

Accession MIMAT0038754
Description Columba livia cli-miR-9631-3p mature miRNA
Sequence 57 - UGUGAGAGGAGUGUCUGACUGUU - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196