Stem-loop cli-mir-9633

Accession

MI0030112

Description

Columba livia cli-mir-9633 precursor miRNA

Sequence

gggcuccacaugcAGAGGAUGGAGCUGAAUGGGAuuuugcugccugaaauggucCCAUCCAGCCCCAGUCCUGCUGCacggggaggca
.(.((((.(.((((((((((((.((((.((((((((...(.....)....)))))))).)))).))).)))).))))).).)))).).

Structure

g g    a a     -    -   A    A        -uug u 
 g cucc c ugcAG AGGA UGG GCUG AUGGGAuu    c g
 | |||| | ||||| |||| ||| |||| ||||||||    | c
 c gagg g aCGUC UCCU ACC CGAC UACCcugg    g c
a g    g c     G    G   C    C        uaaa u 

Annotation confidence Not enough data

Genome context

KB375367.1: 761132-761219 [-]

Mature cli-miR-9633-5p

• Accession: MIMAT0038757
• Description: Columba livia cli-miR-9633-5p mature miRNA
• Sequence: 14 - AGAGGAUGGAGCUGAAUGGGA - 34
• Evidence: experimental ; Illumina [1]

Mature cli-miR-9633-3p

• Accession: MIMAT0038758
• Description: Columba livia cli-miR-9633-3p mature miRNA
• Sequence: 55 - CCAUCCAGCCCCAGUCCUGCUGC - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196