miRBase entry: cli-mir-9638

Stem-loop cli-mir-9638


Accession
MI0030118
Description
Columba livia cli-mir-9638 precursor miRNA


Sequence

aaauugagucaucagcAGCAAGGACCACUUAGUCCUGCucuccucucucucacgccacAGGUCUAAGUGGUCCUCGCUGCcgaugacucaauaca
..(((((((((((.(((((.((((((((((((.((((....................)))).)))))))))))).))))).)))))))))))...

Structure
-aa           a     A            U    Cucuccucu 
   auugagucauc gcAGC AGGACCACUUAG CCUG         c
   ||||||||||| ||||| |||||||||||| ||||          
   uaacucaguag CGUCG UCCUGGUGAAUC GGAc         u
aca           c     C            U    accgcacuc 


Annotation confidence Not enough data
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Genome context
KB375508.1: 134059-134153 [+]

Database links

Mature cli-miR-9638-5p

Accession MIMAT0038769
Description Columba livia cli-miR-9638-5p mature miRNA
Sequence 17 - AGCAAGGACCACUUAGUCCUGC - 38
Evidence experimental
Illumina [1]

Mature cli-miR-9638-3p

Accession MIMAT0038770
Description Columba livia cli-miR-9638-3p mature miRNA
Sequence 59 - AGGUCUAAGUGGUCCUCGCUGC - 80
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196