Stem-loop cli-mir-9639

Accession

MI0030119

Description

Columba livia cli-mir-9639 precursor miRNA

Sequence

ucuccggggcgguggaAGGAGCCGGUAGCUGUGCAGCCcgcuguccgacagcgCUGCUGAGCUCACGGCACCGACcaccgugcgcggccu
...((((.(((((((..((.((((..((((..(((((..(((((...))))))))))..))))..)))).))..))))))).).)))...

Structure

ucu   - g       aA  A    GU    GU     Cc     c 
   ccg g gcggugg  GG GCCG  AGCU  GCAGC  gcugu  
   ||| | |||||||  || ||||  ||||  |||||  ||||| c
   ggc c ugccacC  CC CGGC  UCGA  CGUCg  cgaca  
ucc   g g       AG  A    AC    GU     --     g 

Annotation confidence Not enough data

Genome context

KB375449.1: 2018342-2018431 [+]

Mature cli-miR-9639-5p

• Accession: MIMAT0038771
• Description: Columba livia cli-miR-9639-5p mature miRNA
• Sequence: 17 - AGGAGCCGGUAGCUGUGCAGCC - 38
• Evidence: experimental ; Illumina [1]

Mature cli-miR-9639-3p

• Accession: MIMAT0038772
• Description: Columba livia cli-miR-9639-3p mature miRNA
• Sequence: 54 - CUGCUGAGCUCACGGCACCGAC - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196