Stem-loop cli-mir-9647

Accession

MI0030127

Description

Columba livia cli-mir-9647 precursor miRNA

Sequence

aggugagggcugguUCCCGCGCUGGUGUGUGGCUCCguggccccgagcugcccgggAGCCGCUCACCAGCGCUGGUGUcucuguccccaggu
.((.((.((..((..((.(((((((((.((((((((..(((........)))..)))))))).))))))))).))..)).)).)).))....

Structure

---a  u  g  cu  uU  C         U        gu   ccc 
    gg ga gg  gg  CC GCGCUGGUG GUGGCUCC  ggc   g
    || || ||  ||  || ||||||||| ||||||||  |||    
    cc cu uc  cU  GG CGCGACCAC CGCCGAgg  ccg   a
ugga  c  g  -u  GU  U         U        gc   ucg 

Annotation confidence Not enough data

Genome context

KB375841.1: 292030-292121 [+]

Mature cli-miR-9647-5p

• Accession: MIMAT0038787
• Description: Columba livia cli-miR-9647-5p mature miRNA
• Sequence: 15 - UCCCGCGCUGGUGUGUGGCUCC - 36
• Evidence: experimental ; Illumina [1]

Mature cli-miR-9647-3p

• Accession: MIMAT0038788
• Description: Columba livia cli-miR-9647-3p mature miRNA
• Sequence: 57 - AGCCGCUCACCAGCGCUGGUGU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196