miRBase entry: pbv-mir-30a

Stem-loop pbv-mir-30a


Accession
MI0030183
Description
Python bivittatus pbv-mir-30a precursor miRNA


Sequence

cuguugacagugagcgauUGUAAACAUCCUCGACUGGAAGCUgugaagcagcagauggggCUUUCAGUCGGAUGUUUGCAGCugccaacugccacag
((((.(.((((..(((.((((((((((((..(((((((((((.(............).))))))))))))))))))))))).)))..))))).))))

Structure
    u a    ga   a            UC           g gaagc 
cugu g cagu  gcg uUGUAAACAUCC  GACUGGAAGCU u     a
|||| | ||||  ||| ||||||||||||  ||||||||||| |      
gaca c guca  cgu GACGUUUGUAGG  CUGACUUUCgg g     g
    c -    ac   C            --           g uagac 


Annotation confidence Not enough data
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Genome context
KE957005.1: 35865-35961 [+]

Database links

Mature pbv-miR-30a-5p

Accession MIMAT0038870
Description Python bivittatus pbv-miR-30a-5p mature miRNA
Sequence 19 - UGUAAACAUCCUCGACUGGAAGCU - 42
Evidence experimental
Illumina [1]

Mature pbv-miR-30a-3p

Accession MIMAT0038871
Description Python bivittatus pbv-miR-30a-3p mature miRNA
Sequence 61 - CUUUCAGUCGGAUGUUUGCAGC - 82
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196