miRBase entry: pbv-mir-33-1

Stem-loop pbv-mir-33-1


Accession
MI0030191
Description
Python bivittatus pbv-mir-33-1 precursor miRNA


Sequence

ggguggcaacuguaGUGCAUUGUAGUUGCAUUGCAuguucuggcaauacucaugCAAUGUUUCUGCAGUGCAGUUcagaggcaugccu
((((.((..(((.(.((((((((((..((((((((((.............))))))))))..)))))))))).).)))..))..))))

Structure
    -g  aa   u G          UU          uucug 
gggu  gc  cug a UGCAUUGUAG  GCAUUGCAug     g
||||  ||  ||| | ||||||||||  ||||||||||     c
uccg  cg  gac U ACGUGACGUC  UGUAACguac     a
    ua  ga   U G          UU          ucaua 


Annotation confidence Not enough data
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Genome context
KE955944.1: 80254-80341 [-]

Database links

Mature pbv-miR-33-5p

Accession MIMAT0038882
Description Python bivittatus pbv-miR-33-5p mature miRNA
Sequence 15 - GUGCAUUGUAGUUGCAUUGCA - 35
Evidence experimental
Illumina [1]

Mature pbv-miR-33-3p

Accession MIMAT0038883
Description Python bivittatus pbv-miR-33-3p mature miRNA
Sequence 55 - CAAUGUUUCUGCAGUGCAGUU - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196