miRBase entry: pbv-mir-92a-2

Stem-loop pbv-mir-92a-2

Accession

MI0030197

Description

Python bivittatus pbv-mir-92a-2 precursor miRNA

Sequence

gagcuccuuccuccguggguugggauuuguuguauuacucggagaucucugaacagUAUUGCACUUGUCCCGGCCUGUggaggaccggggagaau
...(((((((((((((((((((((((..((.(((.((((((((....)))))...))).)))))..))))))))))))))))))...)))))...

Structure

gag     ---                  uu  u   u   ---     g 
   cuccu   uccuccguggguugggau  gu gua uac   ucgga a
   |||||   ||||||||||||||||||  || ||| |||   |||||  
   gaggg   aggaggUGUCCGGCCCUG  CA CGU AUg   agucu u
uaa     gcc                  UU  -   U   aca     c

Annotation confidence Not enough data

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Genome context

KE958055.1: 269-363 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from pbv-mir-92a-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature pbv-miR-92a-3p

Accession	MIMAT0038889
Description	Python bivittatus pbv-miR-92a-3p mature miRNA
Sequence	57 - UAUUGCACUUGUCCCGGCCUGU - 78
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196