Stem-loop pbv-mir-107

Accession

MI0030209

Description

Python bivittatus pbv-mir-107 precursor miRNA

Sequence

cucuuugcuuucAGCUUCUUUACAGUGUUGCCUUGuggcauggaguucaAGCAGCAUUGUACAGGGCUAUCaaagcauagaga
((((.((((((.((((.((.(((((((((((.(((.(((.....))))))))))))))))).))))))...)))))).)))).

Structure

-    u      --c    U  U           C   u   a 
 cucu ugcuuu   AGCU CU UACAGUGUUGC UUG ggc u
 |||| ||||||   |||| || ||||||||||| ||| ||| g
 gaga acgaaa   UCGG GA AUGUUACGACG Aac uug g
a    u      CUA    -  C           -   -   a 

Annotation confidence Not enough data

Genome context

KE955805.1: 52248-52330 [-]

Mature pbv-miR-107-5p

• Accession: MIMAT0038907
• Description: Python bivittatus pbv-miR-107-5p mature miRNA
• Sequence: 13 - AGCUUCUUUACAGUGUUGCCUUG - 35
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-107-3p

• Accession: MIMAT0038908
• Description: Python bivittatus pbv-miR-107-3p mature miRNA
• Sequence: 50 - AGCAGCAUUGUACAGGGCUAUC - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196