miRBase entry: pbv-mir-124a-1

Stem-loop pbv-mir-124a-1


Accession
MI0030212
Description
Python bivittatus pbv-mir-124a-1 precursor miRNA


Sequence

cgaggcucugucucucCGUGUUCACAGCGGACCUUGAUuuaaugucauacaauUAAGGCACGCGGUGAAUGCCAAgagcagggcuugaag
..((((((((.((((..((((((((.(((..((((((((...........))))))))..))).))))))))..))))))))))))....

Structure
--cg        u    cC        A   GA        uaau 
    aggcucug cucu  GUGUUCAC GCG  CCUUGAUu    g
    |||||||| ||||  |||||||| |||  ||||||||    u
    uucgggac gagA  CGUAAGUG CGC  GGAAUuaa    c
gaag        -    AC        G   AC        caua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KE957509.1: 32622-32711 [-]

Database links

Mature pbv-miR-124a-5p

Accession MIMAT0038913
Description Python bivittatus pbv-miR-124a-5p mature miRNA
Sequence 17 - CGUGUUCACAGCGGACCUUGAU - 38
Evidence experimental
Illumina [1]

Mature pbv-miR-124a-3p

Accession MIMAT0038914
Description Python bivittatus pbv-miR-124a-3p mature miRNA
Sequence 54 - UAAGGCACGCGGUGAAUGCCAA - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196